Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1136g00001 ATGTTTACTCCAAATCCAGGAGACCAGGATGATTCTCCTCATCAAGAAAATCAGGAACATTATGTTGAGATTTTGAATAGCATTGAGTTTACATGGCCTTGTGCTGGACAAGGAAAGATTAGAACATGTGGTGAACATTTTTCCTTAGATCATATATTATTCTTATTACAGATTGCTGATTTCGGATTAACCAAGCTGACTGATATTGCAAGTTCAACAAATAACACTGATCATGTGGCAGGCACATTTGGTTATATGTCGCCCGAAAATGCATACGGACATATTTCTCGCAAGATAGATGTATATGCTTTCGGAGTTGTTCTTTACGAACTAATTTCTGCTAAAGCAGCTGTGATCAAGATTGATAAAACCGAGTTCAAGAGCCTTGAGTTCAAGAACCTTGTATCTTTGTTTGATGAAGTTATTGATCAAGAGGGAAATCCTATAGAGGAAGGTCTAAGAAAACTAGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCGATAAAAAAGATGACACAGCTTGCCAAGACTTGCACGAACCGAGATCCGAGACAACGTCCAAGAATGAGAGCTGTTGTGGTTTCTCTTATGAAACTAAGTACTACAATTGATGATAGCAGTATGATAGTTAGTAAAGCATTGAGTTGA 654 0.3746 MFTPNPGDQDDSPHQENQEHYVEILNSIEFTWPCAGQGKIRTCGEHFSLDHILFLLQIADFGLTKLTDIASSTNNTDHVAGTFGYMSPENAYGHISRKIDVYAFGVVLYELISAKAAVIKIDKTEFKSLEFKNLVSLFDEVIDQEGNPIEEGLRKLVDPRLGDNYSIDSIKKMTQLAKTCTNRDPRQRPRMRAVVVSLMKLSTTIDDSSMIVSKALS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1136g00001 217 Gene3D Transferase(Phosphotransferase) domain 1 45 214 - -
Trme1136g00001 217 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 57 209 IPR044812 GO:0019199|GO:0045087
Trme1136g00001 217 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1136g00001 217 SUPERFAMILY Protein kinase-like (PK-like) 55 198 IPR011009 -
Trme1136g00001 217 Pfam Protein kinase domain 56 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1136g00001 Trme-Chr1136 400 1845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1136g00001 54 207 Receptor kinase-like Gene Family AT3G21630 50.000 4.56e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme1136g00001 Pkinase 6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1136g00001 - K13429 vvo:131616003 244.588