Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11366g00001 GTATCTGAGGCGGGCGAGAACTTCAGTGTTGGACAGAGGCAACTGTTGAGTCTTGCCAGGGCTTTGTTGCGGAGATCGAAGATTTTAGTACTTGATGAGGCAACTGCAGCGGTTGATGTTAGAACAGATGCACTCATACAGAAAACAATCAGGGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGCCTCAACACTATTATTGATTGTGATCGGGTTCTTTTGCTTGATGGAGGCAAGGTTCTTGAATATGATACCCCCGAGGAGCTCTTGTCAAATGAGGGTAGTGCTTTCTCTAAGATGGTGCAAAGTACAGGAGCTGCAAATGCCCAATACTTACGCAGCTTAGTACACGGTGGGGACAAGACAGAAAGAGAAGAGAACAAGAATCTGGATGGTCAGAGAAAATGGCTAGCTTCTTCTCGGTGGGCTGCTGCAGCCCAGTTTGCTCTTGCTGTGAGTCTCACTTCGTCACAGAATGACCTACAACGTTTGGAAGTAGAAGATGAGAATAGTATTCTCAAGAAGACAAAGGATGCTCTCATAACTTTGCAGGGTGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAAACCAACGCCAAATATCCTCTGAGGGATGGTGGACATCGCTTTACAAGATGCTTGAAGGTCTTGCTATGATGAGCAGATTGGCCAGGAACAGGCTAGATCAATCAGACTACGGTTTTGAGAACAGCTCAATTGACTTTGATCAAATTGATATGTAG 762 0.4409 VSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRVLLLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRSLVHGGDKTEREENKNLDGQRKWLASSRWAAAAQFALAVSLTSSQNDLQRLEVEDENSILKKTKDALITLQGVLERKHDKEIEESLNQRQISSEGWWTSLYKMLEGLAMMSRLARNRLDQSDYGFENSSIDFDQIDM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11366g00001 253 Gene3D - 1 119 IPR027417 -
Trme11366g00001 253 Pfam ABC transporter 3 36 IPR003439 GO:0005524
Trme11366g00001 253 FunFam AGAP012735-PA 1 109 - -
Trme11366g00001 253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 103 IPR027417 -
Trme11366g00001 253 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11366g00001 Trme-Chr11366 210 1615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11366g00001 1 111 Calmodulin-binding Proteins AT2G36910 41.071 1.60e-16 77.0