Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme113473g00001 ATGTTTTGCGGAATTGTTTCAAGAGCTGCAACACTCAATGTCCTTTCAACTGGAGTGGCAGGAAATTATGACGGAGCCTTGCAAGTGATGTCAGCTGAATTTCAGGTTGCTTCACCATCTATTCCTACTCTTGAACACTATTTCGTGAGATACTGTAAACTGCTTCCAAACCGTATATGGGTAGTGGCTGATGTTCCCTTGGATAATTTTTCTCCTTCATCTAATAGTTCTATCTCAAGAACCAAAAGAAGAGCTTCTGGTTGTTTGATTCAAGAACTACCACATGATTACTCTAATGTTACATGGATTGAACATTT 317 0.3912 MFCGIVSRAATLNVLSTGVAGNYDGALQVMSAEFQVASPSIPTLEHYFVRYCKLLPNRIWVVADVPLDNFSPSSNSSISRTKRRASGCLIQELPHDYSNVTWIEH 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme113473g00001 105 SUPERFAMILY Bet v1-like 9 105 - -
Trme113473g00001 105 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 105 IPR042160 -
Trme113473g00001 105 Pfam START domain 6 105 IPR002913 GO:0008289
Trme113473g00001 105 ProSiteProfiles START domain profile. 1 105 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme113473g00001 Trme-Chr113473 1 408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme113473g00001 1 105 Homeobox Transcription Factor Family AT4G21750 67.619 2.10e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme113473g00001 K09338 - gmx:100815499 152.525