Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme113467g00001 GCTTTAGGGGTCAGAGACCTCTCCTATCGTCTAGCTTTTATTGCCAACTCTGTTCAGATTTGTGATGGTAGAAGAGAAATAGACATCAGGAATAGAAAGAAGGATTCAGATGAAGATGATCAGCAATTTACTGAACAGGAATTGGATGAAGTTCAACGAATGAGGAACACTCCAGATTTCTTCACTAAACTTGTTGAGAGTGTTGCTCCAACTATTTTTGGTCATCAAGATATAAAGCGAGCAATCCTTCTTATGCTTATGAGTGGGGTCCACAAATCTACTCATGAAGGCATCAGCCTTAGAGGAGACATAAATGTTTGTATTGTTGGAGATCCTAGCTGTGCAAAGTCTCAATTTCTTAAGTACTAC 369 0.393 ALGVRDLSYRLAFIANSVQICDGRREIDIRNRKKDSDEDDQQFTEQELDEVQRMRNTPDFFTKLVESVAPTIFGHQDIKRAILLMLMSGVHKSTHEGISLRGDINVCIVGDPSCAKSQFLKYY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme113467g00001 123 ProSiteProfiles MCM family domain profile. 60 123 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme113467g00001 123 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 2 122 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme113467g00001 123 Pfam MCM P-loop domain 48 122 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme113467g00001 123 Gene3D - 38 123 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme113467g00001 Trme-Chr113467 2 646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme113467g00001 1 122 Core DNA Replication Machinery Family AT5G44635 81.301 7.76e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme113467g00001 K02542 - mnt:112091254 226.098