Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme113462g00001 GCCTATTCTACAGTAGGAACACCTGACTATATTGCCCCTGAAGTTCTACTGAAAAAAGGATATGGCCTGGAATGTGATTGGTGGTCTTTGGGAGCTATAATGTATGAAATGCTAGTGGGATATCCACCCTTTTATTCAGATGAGCCAATGTTGACTTGTAGAAAGGTAATGCCTGGGTCAACTGTTTATGAATTATGA 198 0.404 AYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKVMPGSTVYEL 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme113462g00001 65 ProSiteProfiles Protein kinase domain profile. 1 65 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme113462g00001 65 Gene3D Transferase(Phosphotransferase) domain 1 4 61 - -
Trme113462g00001 65 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 57 - -
Trme113462g00001 65 Pfam Protein kinase domain 3 48 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme113462g00001 65 SUPERFAMILY Protein kinase-like (PK-like) 2 59 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme113462g00001 Trme-Chr113462 174 487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme113462g00001 1 57 AGC Kinase Gene Family AT2G20470 91.228 4.52e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme113462g00001 Pkinase 1.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme113462g00001 K08790 - gmx:100789649 124.405