Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11343g00001 ATGGTCGGTGCACCGGAGAAACCTCTGGAGCTGCCTCTCTTTCCTTTAATTATGGGGAGAAAGTTGATTGCTGGAAGCGGAATTGGAGGGATGAAAGAAACTCAAGAGATGATTGACTTTGCTGCTAAACACAATGTAAAACCCGACATTGAAGTCATTCCTGTGGATTATGTTAACACTGCAATGGAGCGACTCGTCAAAGCAGATGTTAAATATCGATTTGTGATCGACATTGGAAACACTCTGAAAACAAGCTCTTAA 261 0.4215 MVGAPEKPLELPLFPLIMGRKLIAGSGIGGMKETQEMIDFAAKHNVKPDIEVIPVDYVNTAMERLVKADVKYRFVIDIGNTLKTSS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11343g00001 86 Gene3D - 1 48 - -
Trme11343g00001 86 PANTHER ALDEHYDE REDUCTASE 1 81 IPR047109 GO:0016616
Trme11343g00001 86 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 78 IPR036291 -
Trme11343g00001 86 FunFam Putative cinnamyl alcohol dehydrogenase 6 49 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11343g00001 Trme-Chr11343 3 354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11343g00001 1 83 Monolignol Biosynthesis Gene Families AT4G37990 74.699 3.05e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11343g00001 K23232 - fve:101297378 151.369