Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11334g00001 AAAATGGCTTTTGATATAGTTCGGCAAAAGAAAAACCGNACTAGCAGAGACCCAGGAAAACGCAGCCGGTTAAGAGATATTGAGGAAGTTTGTGATGTATTTAAAAATAACAAGGGGACACATAAAGTTGAAGGCATAATGTTTGATTTGTCTCAAAAGGGAGATTTGCATGTTCAGGCTGACACATTCAACAAGATGACTAAGTTAAAGTTTCTAAGATTGTATGTCCCTTTGAGAAAGAAGAGATTGGCTACCGTATATCATCCTGAAGATATGTTGCCATTTTCTGGTAAATTGATATATCTTGAGTGGAATGGATGTCCCTTGAAGTCTCTTCCACACCCTTTTTGTGTGGAGCTACTTGTTGAGATTCACTTGCAGCACAGCAATGTAGAATATCTTTGGCATGGGAGGCAGGAACTTCTAAATTTAGAGCTAATCAACCTAAGTGAAAGCAAACAATTGATGGAGCTCCCTGATTTGTCTGGGACCACAAAACTGAAAAAGTTGTATCTCTCAGGTTGTGAGAGTTTACGTGAAGTTCATCCATCTGTTTTTTCCAAGGACACGCTTGTTATTTTGCTTGTAGATAGGTGCAAAAATTTGGAGAGTCTTGTTAGTGAGAAGCATTTAACATCTCTACGGGTGATCAGTATCAGTGGCTGCTCAAGTCTTAGGGAATTTTCGTTGTCCGGGGATTTGATTAAAAAGTTGAATTTAAGCAATATAAATATTGAAATACTGCACGCATCCATCAGTTATCTGAGCAATCATGATTTAATGGTTTTAAGACTTAAGAATCTTCCGAAAGCAATGTCTTGCTTGAGATCAATTACTAAGCTTGAGCTTTCAAATTGCAATATAATAACTAAGTCAATGTTAGAAGCCATATTTGATGATCTAGAATCATCAGAAAGGCTAAAGTTGACAGATTCAAAAGACTGGTGGCAATGGTGTAGCAGTCCGGAATGTCTGAAAGAAGAGTTCCGGAGATTTTTTCGTATGAGCAAAGCAACGTTCGAGTTTATTTGCAACGAACTCAATCCAGCTGTTATGAAGAAAAACACCATGCTCCATGATGCAATTCCGGTACGAAAGCATGTGGCGGTTTGTATCTCGAGACTTGCCACCGGTGATGCTCTTAGAATCGTTTCTAAACGATTCGGTTTGGGTATATCCACGTGTCATAAGCTCGTTCTTGAGAGTTTGAGGGTGTTTCTGGAATACCAAATGTTGGTGGTTCAATGTATACTACTCATATTCCAATAA 1269 0.3853 KMAFDIVRQKKNRTSRDPGKRSRLRDIEEVCDVFKNNKGTHKVEGIMFDLSQKGDLHVQADTFNKMTKLKFLRLYVPLRKKRLATVYHPEDMLPFSGKLIYLEWNGCPLKSLPHPFCVELLVEIHLQHSNVEYLWHGRQELLNLELINLSESKQLMELPDLSGTTKLKKLYLSGCESLREVHPSVFSKDTLVILLVDRCKNLESLVSEKHLTSLRVISISGCSSLREFSLSGDLIKKLNLSNINIEILHASISYLSNHDLMVLRLKNLPKAMSCLRSITKLELSNCNIITKSMLEAIFDDLESSERLKLTDSKDWWQWCSSPECLKEEFRRFFRMSKATFEFICNELNPAVMKKNTMLHDAIPVRKHVAVCISRLATGDALRIVSKRFGLGISTCHKLVLESLRVFLEYQMLVVQCILLIFQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11334g00001 422 Gene3D Ribonuclease Inhibitor 8 337 IPR032675 -
Trme11334g00001 422 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 295 IPR044974 GO:0006952
Trme11334g00001 422 SUPERFAMILY L domain-like 47 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11334g00001 Trme-Chr11334 108 1649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11334g00001 5 286 WRKY Transcription Factor Family AT4G12020 34.915 2.45e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11334g00001 - - mtr:11419903 432.18