Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme113231g00001 GCTCAATCTGGAAGAGGCACCATCATTGGCATCATAGACACTGGTATTTGGCCCGAGTCTGATAGCTTTAGAGACGATCACATGGATAATCCTCCTCCTCGTTGGCGTGGTATATGTCAAGTAGGAGAAAGTTTCGATGGCTCTCACTGTAATAGGAAAATCATCGGTGCACGTTGGTATTATAAAGGATACGAAGCTGAATTTGGTAAACTAAATATAAGCAATGGGGTAGAGTACTTATCACCTCGAGATGCATTTGGACATGGAACTCACACATCATCTACCGCAGCCGGTGTACTAGTAGAAAATGCAAGCTTTAAGGGATTAGCTAAAGGATCAGCACGAGGTGG 350 0.44 AQSGRGTIIGIIDTGIWPESDSFRDDHMDNPPPRWRGICQVGESFDGSHCNRKIIGARWYYKGYEAEFGKLNISNGVEYLSPRDAFGHGTHTSSTAAGVLVENASFKGLAKGSARGG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme113231g00001 117 ProSiteProfiles Serine proteases, subtilase domain profile. 1 117 - -
Trme113231g00001 117 SUPERFAMILY Subtilisin-like 3 112 IPR036852 GO:0004252|GO:0006508
Trme113231g00001 117 Pfam Subtilase family 4 113 IPR000209 GO:0006508|GO:0008236
Trme113231g00001 117 Gene3D Peptidase S8/S53 domain 6 117 IPR036852 GO:0004252|GO:0006508
Trme113231g00001 117 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 117 IPR045051 -
Trme113231g00001 117 PRINTS Subtilisin serine protease family (S8) signature 4 23 IPR015500 -
Trme113231g00001 117 PRINTS Subtilisin serine protease family (S8) signature 84 97 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme113231g00001 Trme-Chr113231 87 647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme113231g00001 1 117 Subtilisin-like Serine Gene Family AT5G45650 55.932 1.71e-38 134