Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112964g00001 ATGGTGGATTCGATGAAGAATGTTGCGAATCTTGATGTTGAACTGACTGTTGAAGAAAGGAATTTGCTTTCGGTTGGTTATAAGAATGTGATTGGTGCTCGTAGAGCTTCGTGGAGGATTCTGTCTTCCATAGAGCAAAAGGAAGAGTCGAAGGGAAATGATGTAAATGCGAAACGGATTAAGGAGTATAGGCATAAGGTTGAAACAGAGCTTTCAAACATCTG 224 0.4062 MVDSMKNVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNDVNAKRIKEYRHKVETELSNI 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112964g00001 74 PRINTS 14-3-3 protein zeta signature 63 74 IPR000308 -
Trme112964g00001 74 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Trme112964g00001 74 Gene3D - 1 74 IPR036815 -
Trme112964g00001 74 PANTHER 14-3-3 PROTEIN 1 74 IPR000308 -
Trme112964g00001 74 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Trme112964g00001 74 SUPERFAMILY 14-3-3 protein 1 74 IPR036815 -
Trme112964g00001 74 Pfam 14-3-3 protein 1 74 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112964g00001 Trme-Chr112964 425 648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112964g00001 1 74 14-3-3 family AT1G34760 85.135 1.80e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112964g00001 K06630 - csin:114279818 136.346