Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112932g00001 GCTTATGGTGCAGCAGTCCAGGCTGCTTTGTTGAGCAATGATATTAAAAATGCCCCAAACTTGATGTTGCAAGATGTTACTCCATTGTCTCTAGGTACGTCGTCAATAGAAAAACCTACCCCTGGTGCTGGTGAGAGAATGATGGCCAAAGATAACAACTTGCTAGGTTCATTTATTTTCCCAATTCCTCGTGCTCCTCGACGCCATATTCCTATCAAAGTATGTTTCGCTATAGATGCTGATGGTATACTAAACGTCTCTGCGGAGGAAGAAACCAGTGGTAATAAGAAAGATATTACAATAACAAAAGAAAATGGTAGACTATCAACTGAAGAAATCGATAGAATGATTCAAGAAGCTGAGAGTTTCAAAGCTGAAGATACGAAACTTGAGCAGAAAGCTAAAACAATGAATGATTTGAACGAGTATCTTTACCATGTGAAGAAATTAATTACTGATAATGATGTTAGTTCTCTGATTTCCCCTGTTGACAAGTTGAAGATCTATACTGCAGTT 516 0.3818 AYGAAVQAALLSNDIKNAPNLMLQDVTPLSLGTSSIEKPTPGAGERMMAKDNNLLGSFIFPIPRAPRRHIPIKVCFAIDADGILNVSAEEETSGNKKDITITKENGRLSTEEIDRMIQEAESFKAEDTKLEQKAKTMNDLNEYLYHVKKLITDNDVSSLISPVDKLKIYTAV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112932g00001 172 Gene3D - 109 172 IPR029048 -
Trme112932g00001 172 Coils Coil 113 133 - -
Trme112932g00001 172 PANTHER HEAT SHOCK PROTEIN 70KDA 1 155 IPR013126 GO:0005524|GO:0140662
Trme112932g00001 172 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 42 108 IPR029047 -
Trme112932g00001 172 Pfam Hsp70 protein 44 164 IPR013126 GO:0005524|GO:0140662
Trme112932g00001 172 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 19 138 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112932g00001 Trme-Chr112932 1 648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112932g00001 1 172 Calmodulin-binding Proteins AT3G12580 44.390 1.38e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112932g00001 K03283 - gsj:114370177 146.747