LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme11291g00001	ATGGCTTCTTATAATAAGTCTATTGTAATGGTTGCTCTATGGCACAATGGCCATCGATATATAGAGTTGCATCAGCAAGAAAATGGAGTATTCAATTTCTTCTGCAATCTATGTAATCACAGTTCAAACAGTATCACGGATTTGATGAGACACATGAAAGAAAGAATCCATAAAGATAATCTTTTAAAGGCGAAGAACACTGTTCTTAGGCAACAAAGGTTTCCATTTTATGATGGAGTTTTGTTGTTTGGTCACTCCAGAGTCAACAAATTCCCACCATTTCACCCAATATTTGATCACATTGGGGATAAAGTTTCTGCTAGCCTTAAAGATCTTTCACAAATGGAGCTTCAAGAAAGAATTGATCACTATTCTTCAACAATTCTGAATTCCTTGGTAAATGATCCCGAGATGCTGATTGACACCTTCAATTACGGATACCCTGAACCTAGTATCGATGAAGGTTGTCACCGTTTACAGATATACGCTAAACCGGAAATCAAGAATGTCGGTAACCTTAACTTTTTTATGAGATATGGATATGATATAATGAATTCTGATTTTGAGCCTGCATTAGGAATAGAGAAGGAATTTCATGATATCTACTCTATTTGGTGTGAATGGGGTAATGTGAATCCCCAACCTAATGTTGTTGATGAAGATGATCAACATGATCATGATGATGATGACCGGAATAGAGTTAATGATCCAATCGATGCAATGATTGTGATGAAATTTACTCATGGTATGGGTTCTTTCAGTGATGACAATGCATCTGAACCCAAGATGTGCTTTCTTTGTGATCGCCGCATGAACGTCGGGAATGACGTTGCGGCGTTGTTGGGCAGTCAAAATGATAGAATAATATGCTGTAACCGGAAACTTTTCAATGCTAGAAATAAGGGAAAAGAGATCGGTGGCAGCATAAACATAATCAGG	939	0.3749	MASYNKSIVMVALWHNGHRYIELHQQENGVFNFFCNLCNHSSNSITDLMRHMKERIHKDNLLKAKNTVLRQQRFPFYDGVLLFGHSRVNKFPPFHPIFDHIGDKVSASLKDLSQMELQERIDHYSSTILNSLVNDPEMLIDTFNYGYPEPSIDEGCHRLQIYAKPEIKNVGNLNFFMRYGYDIMNSDFEPALGIEKEFHDIYSIWCEWGNVNPQPNVVDEDDQHDHDDDDRNRVNDPIDAMIVMKFTHGMGSFSDDNASEPKMCFLCDRRMNVGNDVAALLGSQNDRIICCNRKLFNARNKGKEIGGSINIIR	313

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme11291g00001	313	SUPERFAMILY	beta-beta-alpha zinc fingers	26	61	IPR036236	-
	Trme11291g00001	313	PANTHER	ACYL-UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE	10	89	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme11291g00001	Trme-Chr11291	278	1216	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Trme11291g00001		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme11291g00001	-		K09378	tpra:123924479	78.9517