Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1128g00001 TCTCACTCCCGAAATGGACACCGTTTCTCAGTGTTTGATGACTCAGATGAGGAAAATGGAGACTTCAGTCAGCAGCAACAGAAACACAATAACCATGTTTTCTCTTTGGATGGAAGTGTAGCTAGTAAGGATTTTGAAGAGCAGAAATCATTCAACTATAATGCGGAGAAAGAGAAAGGAAAGCAAGTAAAGAGAAGTCTTATGAGCAATGACATAGGAGAAGATGATTACCTTTTGGAGGAGTCAAGGCAACCATTATGGCGCAAAGTCCCAATAGCTTCGAGCCTAATCAATCCATATCGTATAGTCATAGTCATGCGTCTTGTTGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACTCCGGTTCACGATGCATTTGCCTTATGGATAATCTCTGTGGTCTGCGAAATATGGCTCTCTTTGTCTTGGATAGTAGACCAGTTCCCCAAGTGGTTCCCCATGACTCGCGAAACTTACTTGGAGCGCTTGTCAATGAGGTTCGAGCGCGAAGGGGAGCCGAACCTTTTAGCCTCAGTTGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACNGCAAACACAGTTCTATCAATCTTGTCTGTTGATTATCCTGTTGACAAAGTTAGCTGCTATGTCTCCGATGACAGTGCATCTATGCTTCTCTTCGATACTTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCATTTTGTAAGACGTATAACATTGAGCCAAGGGCACCCGAGTCTTATTTTTCTCATAAAGTTGATTACTTGAAAGACAAGGTACATCCATCATTTGTAAAGGATCGCAGGGCTATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTACTTGTTGCGAAGTCTCAGAAAAAACCAGAAGAAGGGTGGGTGCTGCAAGATGGTACTCCATGGCCTGGGAACAACACTGACGATCATCCAGGAATGATTCAGGTGTGTCTGGGAAGTGCTGGTGCTCTTGACAATGAAGGCAAGGAGCTGCCACGGCTTGTGTATGTTTCGCGCGAGAAATGTTCCGGCTATCAGCACCATAACAAAGCTGGAGCCATGAATTCTCTGCTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATAGCAAGGCTCTTAGGGAGGCTATGTGCTTCCTAATGGACCCTCTACTTGGAAAGAAGACTGCTTATGTTCAATTTCCGCGAAGGTTTGATGGAATCGACGGCAACGACCGATATGCTAATCACAACACTGTATTCTTTGATATCAATATGAAATGCCTTGATGGGATTCAAGGTCCCGTGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCTACAAGCCACCATCTGAGAAAAGGCGAAAGACGAACTCTTCATGCTGCTGCTGTTGTTCTGGTGACTCTCGGTCCGCATTTGATGTTGAAGAGATTGATGATGGGCTTGAAGGCTATGATGAGCAAGAGGAATTGTCCTTCATGTCCGTCAAAGCTTTTGAGAAAAAGTTCGGAGAGTCACCAGTTTTCATTGCTTCTGCATTGATGGAAGATGGTGGACTTCCAAAAGGAACTAATACTCGAATACTGATGAAGGAAGCCATTCATGTTATAAGTGTTGGATATGAAGAGAAAACCGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCAGTCACAGAAGACATTTTGACAGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCTAAAAGAGCAGCTTTTAAAGGATCTGCTCCTATAAACCTATCAGACAGATTACACCAAGTTCTGAAATGGGCTTTGGGTTCTACTCAGATTTTTTTTAGTGGCTATTGTCCATTGTGGTATGGCTATAGTGGAAAACTTAAATGGCTTCAAAGGCTCGCTTACACGAATACTATCGTTTATCCTTTCTCTTCCATCCCTCTTCTGGTGTACTGCACAATTCCAGCTATCTGTCTTCTGACTGGAAAGTTCATCCTCCCCACTGTAAGTGCATCATAA 2085 0.4293 SHSRNGHRFSVFDDSDEENGDFSQQQQKHNNHVFSLDGSVASKDFEEQKSFNYNAEKEKGKQVKRSLMSNDIGEDDYLLEESRQPLWRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVVCEIWLSLSWIVDQFPKWFPMTRETYLERLSMRFEREGEPNLLASVDVFVTTADPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKTYNIEPRAPESYFSHKVDYLKDKVHPSFVKDRRAMKREYEEFKVKINVLVAKSQKKPEEGWVLQDGTPWPGNNTDDHPGMIQVCLGSAGALDNEGKELPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNSKALREAMCFLMDPLLGKKTAYVQFPRRFDGIDGNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPSEKRRKTNSSCCCCCSGDSRSAFDVEEIDDGLEGYDEQEELSFMSVKAFEKKFGESPVFIASALMEDGGLPKGTNTRILMKEAIHVISVGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWALGSTQIFFSGYCPLWYGYSGKLKWLQRLAYTNTIVYPFSSIPLLVYCTIPAICLLTGKFILPTVSAS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1128g00001 694 Pfam Cellulose synthase 180 693 IPR005150 GO:0016020|GO:0016760|GO:0030244
Trme1128g00001 694 MobiDBLite consensus disorder prediction 1 15 - -
Trme1128g00001 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 286 471 IPR029044 -
Trme1128g00001 694 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 83 691 - -
Trme1128g00001 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 335 682 IPR029044 -
Trme1128g00001 694 MobiDBLite consensus disorder prediction 1 28 - -
Trme1128g00001 694 FunFam Cellulose synthase 297 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1128g00001 Trme-Chr1128 2 3235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1128g00001 78 693 Cell Wall Biosynthesis AT5G17420 69.614 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1128g00001 K10999 - gmx:100777278 1150.58