Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112794g00001 ATGTATAAGACTTGTGTGGTGGATGCTTTGACAACAAAACATGGTAATGAAGGTACACGGGTTATTGAAAGAGTGATCAAACAGTTACTTATTGAGTTAGACGGTGCAGAGCAACACAAAGGTGTTTTCGTGATTGGTGCAACAAATAGGCCTGAGGTGATGGACAGTGCTCTCCTACGGCCGGGTAGATTTGGTAAT 198 0.4293 MYKTCVVDALTTKHGNEGTRVIERVIKQLLIELDGAEQHKGVFVIGATNRPEVMDSALLRPGRFGN 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112794g00001 66 Gene3D - 7 64 IPR027417 -
Trme112794g00001 66 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 64 IPR027417 -
Trme112794g00001 66 ProSitePatterns AAA-protein family signature. 42 60 IPR003960 GO:0005524|GO:0016887
Trme112794g00001 66 PANTHER AAA-FAMILY ATPASE 7 65 - -
Trme112794g00001 66 Pfam ATPase family associated with various cellular activities (AAA) 7 65 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112794g00001 Trme-Chr112794 1 421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112794g00001 7 64 Calmodulin-binding Proteins AT3G56690 58.333 2.54e-17 72.0