Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112791g00001 ATGTTCCTTGCTGGAAGTGACCAACCAGCAACCACAATTATTTGGGCAATGGCTGAAATGATAAAGGATCCAAGAGTAGTGAAGAAAGCACAAGCTGAAGTGAGAGACATATTCACAAAAAGAGGAAAAATTGATGAAACAAGCATTGATGAGTTAAAATACTTGAAAGCAATCATCAAAGAGGTTCTAAGAATGCATCCTTCTGCTCCTCTTTTATTACCAAGGGAGTCCGGACAAGCTTGCGAGATTGATGGTTATCACATACCAATCAAAAGTAAGGTGATAATTAATGCTTGGGCGATTGGAATGGATCCAAAATATTGGATAGAGCCAGAGAGGTTTTATCCTGAAAG 353 0.3881 MFLAGSDQPATTIIWAMAEMIKDPRVVKKAQAEVRDIFTKRGKIDETSIDELKYLKAIIKEVLRMHPSAPLLLPRESGQACEIDGYHIPIKSKVIINAWAIGMDPKYWIEPERFYPE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112791g00001 117 Pfam Cytochrome P450 1 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 Gene3D Cytochrome P450 1 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 PANTHER OS08G0105600 PROTEIN 1 117 - -
Trme112791g00001 117 SUPERFAMILY Cytochrome P450 1 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 PRINTS E-class P450 group I signature 97 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme112791g00001 117 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112791g00001 Trme-Chr112791 267 619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112791g00001 1 117 Cytochrome P450 AT3G26230 52.101 5.52e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112791g00001 - - lja:Lj0g3v0161499.1 192.586