Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112227g00001 ATGAATGCTATTGAGGAAGTGTTTCAACTCTCTCGAGCGATGTTCGTAGTTGCCTTGCTCGCCACGGTACCTGGATACTGGGCCACGGTTTTCCTAATTGACAAGATCGGACGGTACAGAATCCAGCTTGTTGGATTCCTTGTAATGTGTGTTTGTATGTGGTTTCTTGGACACAATTATAGAGACTACAGGGGAGAAGAATCAAAATGCAAGAAAAATTCAAACTATGACTATTGTGATGGAAACCTAGTCATGTTTGCTATACTTTTTGGACTTACACTTTTCTTTGCTAACTTTGGACCTAATAGTACCACATTTATAGTGCCGGCAGAACTGTTCCCTGCGAGGCTCCGTTCGACGTGTCACGGGATATCGGCGGCAGCTGGAAAATCGGGAGCTATCCTCG 406 0.4458 MNAIEEVFQLSRAMFVVALLATVPGYWATVFLIDKIGRYRIQLVGFLVMCVCMWFLGHNYRDYRGEESKCKKNSNYDYCDGNLVMFAILFGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKSGAIL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112227g00001 135 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 14 135 - -
Trme112227g00001 135 SUPERFAMILY MFS general substrate transporter 13 135 IPR036259 -
Trme112227g00001 135 Gene3D MFS general substrate transporter like domains 1 135 IPR036259 -
Trme112227g00001 135 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 135 IPR020846 GO:0022857
Trme112227g00001 135 Pfam Sugar (and other) transporter 8 130 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112227g00001 Trme-Chr112227 122 527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112227g00001 1 135 Inorganic Solute Cotransporters AT5G43350 54.815 3.36e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112227g00001 K08176 - cam:101509294 204.527