Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112186g00001 ATGCAAAAAACTTTAGCTAGATTTGAAGAATACAGGGAAATGGTGAAAATCAAAGCAAGCAAACTCCAGAAGAAGCATCCTAGGTGTCTTGCTGATGGGAATGAACTTTTAAGGTTCTATGGAACCACTGTTGCCTGTTCTCTTGGTCTCAATGGTTCTTCAAGTCTTTGCCTATCAGAAAAATGTTGTGTTTGTAGAATTATTAGGAGTGGTTTTTCTGCTAAGAAGGAACTTAAAGGTGGCATAGGTGTTTTCACAACATCTACAAGTGGAAGAGCTTTTGAATCTATAGAGATTATTGATAATGAACCATCACTAAGAAAGGCATTGATAGTATGCAGAGTAATTGCTGGTAGGGTTCATAGGCCACTTGAGAACATTCAAGAAATGGCAGCACAAACTGGATTTGATTCATTGGCTGGAAAAGTAGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTTAATCCTAGAGCTCTTCTTCCTTGTTTTGTG 495 0.3737 MQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKKELKGGIGVFTTSTSGRAFESIEIIDNEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112186g00001 165 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 165 - -
Trme112186g00001 165 SUPERFAMILY ADP-ribosylation 13 164 - -
Trme112186g00001 165 Gene3D - 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112186g00001 Trme-Chr112186 78 572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112186g00001 1 165 C2H2 Transcription Factor Family AT5G54630 75.581 5.24e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112186g00001 - - gmx:100787790 307.76