Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112163g00001 ATAGAGATTTGTGCACTCGATGGTGAATTTGGATCTTATGGTTGCAGTGAAGATTGGACAGAAACTGAATTCAATTATAATATCTTGCGCGAAAGAGATGGTAAAAGGCCATTATTGGTTGGTGACAAGATTATTACTCTTGAAAAAGGAGTTGCTTCCATCTCTAAAATTATGTTTACTGATAATTCAAAATGGTTAAGAGGCAAAAAGTTTAGGTTAGGAGTTAAAGCTATGCAAAATGGAGAAAACATTAAGGAAGGTAGAAGTCAACCTTTTAGGGTCAAAGATAACAGAGGAGAATCCTACCAGAAACATTACCCTCCATACTTGAATGATGATGTTTGGCGTTTGGAGAAAATCGCTAAAGATGGAGAATTCCACAAGCGGCTCTCTAACCATGGAATTCACACTGTTAAGGATCTCTTGAAGTTACTCAT 437 0.3661 IEICALDGEFGSYGCSEDWTETEFNYNILRERDGKRPLLVGDKIITLEKGVASISKIMFTDNSKWLRGKKFRLGVKAMQNGENIKEGRSQPFRVKDNRGESYQKHYPPYLNDDVWRLEKIAKDGEFHKRLSNHGIHTVKDLLKLL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112163g00001 145 Pfam Calmodulin binding protein-like N-terminal domain 1 97 IPR046831 -
Trme112163g00001 145 Pfam Calmodulin binding protein central domain 110 145 IPR046830 -
Trme112163g00001 145 PANTHER OS02G0177800 PROTEIN 1 145 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112163g00001 Trme-Chr112163 115 650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112163g00001 1 145 Calmodulin-binding Proteins AT5G57580 50.000 2.03e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112163g00001 - - mtr:25499645 231.491