Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1121607g00001 GTTGAATCCTTTTGGCCCGCCTTATTTGCTAAACTTGCTGAGAAGAAAAATATTAGGGATTTGATTGCCAATGCTGCTGGCGGTGGTGGTGGTGGTGCGGTAGCTGTTGCTGCAGCTCCAGCTGCTGCAGCCGCAGCTGCTCCTGCA 147 0.5306 VESFWPALFAKLAEKKNIRDLIANAAGGGGGGAVAVAAAPAAAAAAAPA 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1121607g00001 49 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 48 - -
Trme1121607g00001 49 Gene3D - 1 25 IPR038716 -
Trme1121607g00001 49 Pfam 60s Acidic ribosomal protein 1 48 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1121607g00001 1 47 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.333 4.41e-13 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1121607g00001 K02942 - vvi:109124269 45.4394