Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112023g00001 AATATCAATAATTCTACTGCAGGTAATTCAGCCAACCAAGCAATTGAATTACTCATTCAGAAAGGAGTACCAGAATCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAAGGAATCCATTGTGTTTGTAAAAGGTTCCCAGCATTGAAAATTGTCACATCTGAGATCGATGTTGCGTTAAATGAAGAGTTTCGTGTTATCCCCGGATTGGGCGAATTTGGTGATCGCTACTTTGGCACTGACGATTGA 252 0.3968 NINNSTAGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPALKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112023g00001 83 Pfam Uracil phosphoribosyltransferase 7 81 - -
Trme112023g00001 83 Gene3D - 5 81 IPR029057 -
Trme112023g00001 83 SUPERFAMILY PRTase-like 8 82 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112023g00001 Trme-Chr112023 2 352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112023g00001 8 83 PRT Gene Family AT5G40870 93.421 1.87e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112023g00001 K00876 - oeu:111367042 155.221