Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme112006g00001 ATGTCGGCTGATGATGGAAAAAATGTGGTAATGAAAGGTGTGACACACGGTGCTTGTGATTATCTAATCAAACCAGTGAGAATTGAGGCTTTGAAGAATATATGGCAGCATGTGGTTAGGAAGAGAAAGAATAGGTGGAAGGATGTGAAGCAATCTGGTGGATTAGATGAAAGAGATCGAGAAAAAAAGGTGTCCAGTGATGTTGATTACTCATCTTCAGCTAATGAAGGCAAGAGCTCGTCAAAGAAGAGGAGGGATGAGGAAGATGAAGCAGATGAGAGGGATGATTCTTCCACGTCAAAGAAGCCGCGAGTTGTTTGGTCTATTGAGCTCCACCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAGTATTTTTTCTGAGATATGA 396 0.4141 MSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNRWKDVKQSGGLDERDREKKVSSDVDYSSSANEGKSSSKKRRDEEDEADERDDSSTSKKPRVVWSIELHQQFMAVVNQLGLDSIFSEI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme112006g00001 131 Gene3D - 1 60 - -
Trme112006g00001 131 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Trme112006g00001 131 MobiDBLite consensus disorder prediction 78 101 - -
Trme112006g00001 131 MobiDBLite consensus disorder prediction 41 103 - -
Trme112006g00001 131 Gene3D - 98 129 - -
Trme112006g00001 131 SUPERFAMILY CheY-like 1 47 IPR011006 -
Trme112006g00001 131 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 122 IPR045279 GO:0009736
Trme112006g00001 131 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme112006g00001 Trme-Chr112006 70 560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme112006g00001 1 125 Response Regulator Gene Family AT4G16110 64.179 4.35e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme112006g00001 - K14491 tpra:123885541 220.705