Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11197g00001 ATGGATACAGTATTGTGTGAAGCTCTAAGCACTGATGATGGTGAGGAGAACACAGTGGCTCAAATTCTGCAAGAAATTGACCAGATTGATGAGGAACTCATCGATTTTGATAACATCAAGAATCCTGATCATAAGTATATATCAGAAATACTGACAGCATCAGGTCTAGTCAGTGACCAAAAGTCTAACCAGATACTTCATTCACATGGTCACTTGATTAATCCAAAGTTATTCTTTGCACTTGAACAAGTAAAGACAAATAAGGTGCATTTCAATATCAAAGATGACACCGAGAAAATTTACAGGGCTTTTAGTTCTGAGAAAATGCAAAGAAAACTCATATTTGATGCTGTTACTGACATGTTAGTTAACAAACTGATATATGAGAATTCTTCTAGAAAGCTAAAAGGGAAGCGGCTTTTCGAAGAGTTATGTACAGAAATAGATGAGTTACAACCTCCAAATAGGAATGTCAGCAATGTTCATGAGGATGAGAATTTGACAAGTTTATTGTGCAGAGATTTGAAAAATCACAACACAATTTGGACTAATTGTTGCAGTGAGAAACCGAATATCGTGTTGGATATCGAACGGTCAATCTTTAAAGATTTGATAACTGAAGTTTGTGAGAGATGA 636 0.3538 MDTVLCEALSTDDGEENTVAQILQEIDQIDEELIDFDNIKNPDHKYISEILTASGLVSDQKSNQILHSHGHLINPKLFFALEQVKTNKVHFNIKDDTEKIYRAFSSEKMQRKLIFDAVTDMLVNKLIYENSSRKLKGKRLFEELCTEIDELQPPNRNVSNVHEDENLTSLLCRDLKNHNTIWTNCCSEKPNIVLDIERSIFKDLITEVCER 211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme11197g00001 211 Pfam Domain of unknown function (DUF4378) 43 207 IPR025486 -
Trme11197g00001 211 PANTHER LONGIFOLIA PROTEIN 22 209 IPR033334 GO:0051513
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme11197g00001 Trme-Chr11197 751 1628 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11197g00001 26 209 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 37.209 3.23e-28 109