Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111961g00001 AAATCATCTGGAAATACCGATCAGGGTTTGATGAAGAAATTGAAAGGGTTCGATGGACTTGCGATGTCAATAGGCAATGGCCATGCTGAGAGTGCAGAGCCTGGAGCTGAAAGCAAGCTGTCACAGAGCGTGGATACTGACGGTTCAAGTGATGGAAGTGACAGCAACACTTCAGGGGTAAGGACTTGCTTGCAATGCAATTCTTATTCTGAACTTTGTTGA 222 0.455 KSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAEPGAESKLSQSVDTDGSSDGSDSNTSGVRTCLQCNSYSELC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111961g00001 73 MobiDBLite consensus disorder prediction 22 61 - -
Trme111961g00001 73 Pfam Disordered region downstream of MFMR 7 60 - -
Trme111961g00001 73 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111961g00001 Trme-Chr111961 2 433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111961g00001 1 60 bZIP Transcription Factor Family AT2G46270 66.129 1.50e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111961g00001 K09060 K01792 gmx:100781875 92.0485