Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1118408g00001 ATGGTTGATCTTGGAGGCAGTGAACGGTTGCTGAAAACTGGGGCCAAAGGACTAACACTTGACGAAGGACGAGCTATTAATCTCTCTCTTTCAGCTCTAGCGGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGGCAAGTATTCTAA 162 0.463 MVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRQVF 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1118408g00001 53 Gene3D Kinesin motor domain 1 52 IPR036961 -
Trme1118408g00001 53 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 51 IPR027417 -
Trme1118408g00001 53 ProSiteProfiles Kinesin motor domain profile. 1 53 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme1118408g00001 53 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 51 IPR027640 GO:0003777|GO:0007018
Trme1118408g00001 53 Pfam Kinesin motor domain 1 51 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1118408g00001 2 50 Calmodulin-binding Proteins AT5G65930 55.102 5.78e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1118408g00001 - - gmx:100778856 92.8189