Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11181g00001 ATGTGTGTGAATGCAGACATCCGTGGAAAGGGGTTCATGGCACAGAACATTGGATTTGTGAACTCAGCGGGNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCAAGACACCTTATGGGCAGTTTCAGGCAGACAATTCTACAAGAACTGTGAAATCTACGGTACTGTCGATTTCATCTATGGCAACGCAGCTGCTGTATTTCAAGACTGCATGATTTACGCACGCTATCGACAGTTTGTGACATTCACCGCTCAGTCACGCGAGAGTCCAAACGAGAAGACAGGTTTCACATTCCAACGTTGTAAATTCAGCATGTCACCTGAGGATGAAAACAAAAAGTCAGAGGTGGTGCGTGCCACATTGGGACGTCCTTGGAGGGCATATTCCACGGTGGCTATACTGCAGTGTTACATAGATTCAATGGTGGATCCTGGAGGTTGGGAACAGATGCCGGGACAGCCCATTGATAAGGTTACTTATGTGGAGTATAAGAATGTTGGTCCTGGGTCTAACACTGATGGTAGAGTGAATTGGCCTGGTGTTAGA 594 0.4074 MCVNADIRGKGFMAQNIGFVNSAGXXXXXXXXXXXXXXXXXXXXXXXXXXQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMIYARYRQFVTFTAQSRESPNEKTGFTFQRCKFSMSPEDENKKSEVVRATLGRPWRAYSTVAILQCYIDSMVDPGGWEQMPGQPIDKVTYVEYKNVGPGSNTDGRVNWPGVR 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11181g00001 198 SUPERFAMILY Pectin lyase-like 7 197 IPR011050 -
Trme11181g00001 198 Pfam Pectinesterase 7 198 IPR000070 GO:0030599|GO:0042545
Trme11181g00001 198 Gene3D - 2 198 IPR012334 -
Trme11181g00001 198 Coils Coil 51 53 - -
Trme11181g00001 198 PANTHER PECTINESTERASE 7 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11181g00001 Trme-Chr11181 1 594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11181g00001 7 198 Carbohydrate Esterase AT2G26440 40.306 6.55e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11181g00001 - K01051 gmx:102665195 265.774