Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1118181g00001 ATGTCTTGTCCACACATAAGTGGGTTAGCTGCACTACTGAAAGCAGCTCATCCAACTTGGAGTCCAAGTGCGATTAAATCTGCACTTATGACAACAGCTTATATACACGACAATTCCAAGTCACCACTTCGTGATGCTGCTGATAGATCCTTTTCAACTCCATGGGCTCACGGTGCTGGCCATGTC 186 0.4624 MSCPHISGLAALLKAAHPTWSPSAIKSALMTTAYIHDNSKSPLRDAADRSFSTPWAHGAGHV 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1118181g00001 62 SUPERFAMILY Subtilisin-like 1 62 IPR036852 GO:0004252|GO:0006508
Trme1118181g00001 62 Pfam Subtilase family 1 38 IPR000209 GO:0006508|GO:0008236
Trme1118181g00001 62 Gene3D Peptidase S8/S53 domain 1 62 IPR036852 GO:0004252|GO:0006508
Trme1118181g00001 62 ProSiteProfiles Serine proteases, subtilase domain profile. 1 62 - -
Trme1118181g00001 62 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 62 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1118181g00001 Trme-Chr1118181 1 186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1118181g00001 1 62 Subtilisin-like Serine Gene Family AT2G05920 79.032 3.07e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1118181g00001 - - egt:105968024 120.553