Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11175g00001 ATGGAACTGGTGTCGCTTCCAAACAGCATTGTTAATCTAAACCATCTGTTTAAGCTTGATTGTTCTGGTTGTTGCAGTTTGACAGAAATCCCAAATAACATTGGTAGTTTGTCATCATTGAGGGAACTTTCACTTCAAGAAAGCAGTATTGTGAACCTTCCTGAGAGCATAGCTCATCTCTCAAGTTTAAAATCGCTTGATTTAAGTGATTGCAAAAGGCTTGAATGTATCCCGCAACTACCATCATCTCTAAACCAGCTGATGGCATATGATTGCCCGTCCGTTGGAAGAATGATTCCAAATTCAAGGTTGGAACTACCATCAAATTCCGACAAGGATACCTTCGAATTTCATTTCCTCAATAGTCAAGGACTGGATGAAACTGCTTGTAGTAATCTTGGGGATGAAGCATGGCTTAGGATCACTGAAGATNCATATAAGTGTGTGTTTTTCTATTTTCCTGGGAGTGCAGTTCCACGTTGGTTCCCTTATCGTTGTACGGGATGTTTGGTAACCATGAAAAAAGATTTTCAAGATTGGCCAAGTAATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGGCATATGGATGATGATAGAATACCAATTAGTAGTAGCTTTACATACAGATTAACATTTGAATCTGATGGCTCCACACACATTCTTCCTACCCATGACCATATAAAAAACTATTTCTATTGGAAGGATCGAAGTAGGCTAGTCGTCCAAGATCACACATTCATATGGAAATATCACTTGGATTTTGCAAGCATTGACAATAGGCTCTTTGATGCCCACAGCTTCACTTTTGAGATCAGCAAACATGATGATCTCTTATATTCTAAATCAAGTGTCATGGTGAAAGAGTGTGGAATATGCCCTCTGTTTTCAACAAAAAAAAAAGGACGAGAACGTGGTTATAGTTTGAGATTTTCAAATGACATTAGCGAACCGAGAAGGAGCAAAGCTGCATAA 981 0.3884 MELVSLPNSIVNLNHLFKLDCSGCCSLTEIPNNIGSLSSLRELSLQESSIVNLPESIAHLSSLKSLDLSDCKRLECIPQLPSSLNQLMAYDCPSVGRMIPNSRLELPSNSDKDTFEFHFLNSQGLDETACSNLGDEAWLRITEDXYKCVFFYFPGSAVPRWFPYRCTGCLVTMKKDFQDWPSNNRLVGFALSVVLGHMDDDRIPISSSFTYRLTFESDGSTHILPTHDHIKNYFYWKDRSRLVVQDHTFIWKYHLDFASIDNRLFDAHSFTFEISKHDDLLYSKSSVMVKECGICPLFSTKKKGRERGYSLRFSNDISEPRRSKAA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11175g00001 326 Pfam C-JID domain 153 299 IPR045344 -
Trme11175g00001 326 SUPERFAMILY L domain-like 4 94 - -
Trme11175g00001 326 PANTHER LEUCINE-RICH REPEAT-CONTAINING 4 218 - -
Trme11175g00001 326 Gene3D Ribonuclease Inhibitor 1 112 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11175g00001 Trme-Chr11175 602 1582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11175g00001 3 73 WRKY Transcription Factor Family AT4G12020 40.845 2.17e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11175g00001 - - lja:Lj4g3v3113360.1 336.65