Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11167g00001 ATGCAGATAGTGAACTGGAAATCTCACTTGAAATTTCCTGAGGAAGCTGGGCTATCGCCAGAGGCTAAAGATCTTATTAGTAGACTTTTATGTAATGTCAATCACAGGCTGGGATCAAACGGTGCTGATGAAATAAAGGCTCATCCGTTCTTCAATGGCGTTGAATGGGATAAACTATATCATATTGAAGCTGCATTTATACCTGAGGTCAATGATGAATTAGATACTCAGAATTTTGAAAAGTTCGATGAGGTATATTAG 261 0.3793 MQIVNWKSHLKFPEEAGLSPEAKDLISRLLCNVNHRLGSNGADEIKAHPFFNGVEWDKLYHIEAAFIPEVNDELDTQNFEKFDEVY 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11167g00001 86 FunFam Non-specific serine/threonine protein kinase 70 80 - -
Trme11167g00001 86 Gene3D Transferase(Phosphotransferase) domain 1 2 71 - -
Trme11167g00001 86 ProSiteProfiles AGC-kinase C-terminal domain profile. 52 86 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme11167g00001 86 SUPERFAMILY Protein kinase-like (PK-like) 3 82 IPR011009 -
Trme11167g00001 86 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 3 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11167g00001 Trme-Chr11167 1206 1565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11167g00001 2 84 AGC Kinase Gene Family AT1G03920 73.494 1.22e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11167g00001 K08790 - gmx:100783286 159.844