Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111634g00001 ATGAAAAAACTCAGATTGCTTCAACTTGCTGGTGTACAACTTGATGGGGACTTTGAATATCTTTCAAGAAATCTGAGATGGCTTTCATGGAATGGATTTCCTCTATCATGCATTCCTACAAACTTTTATCAAGGAAATTTAGTTTCCATTGAGTTAGAAAATAGTAATCTCAGCCATGTGTGGAAAGAGGCCCAGACGCTGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCACATTATCTAACACACACCCCAGACTTTTCAAATTTGCCTAATCTTGAAAAGCTAGTCCTCAAAGATTGTCCAATGTTGTCCGAG 318 0.3774 MKKLRLLQLAGVQLDGDFEYLSRNLRWLSWNGFPLSCIPTNFYQGNLVSIELENSNLSHVWKEAQTLEKLKILNLSHSHYLTHTPDFSNLPNLEKLVLKDCPMLSE 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111634g00001 106 Pfam Leucine rich repeat 46 102 IPR001611 GO:0005515
Trme111634g00001 106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 104 IPR044974 GO:0006952
Trme111634g00001 106 SUPERFAMILY L domain-like 2 103 - -
Trme111634g00001 106 Gene3D Ribonuclease Inhibitor 1 106 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111634g00001 Trme-Chr111634 65 489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111634g00001 1 101 WRKY Transcription Factor Family AT4G12020 37.607 4.28e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111634g00001 - - tpra:123906985 194.126