Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111628g00001 GATGTTCTTGTTTTGAAGGTTTTAGGGAGTGGTGATAAAGTTGAGGTTAAGGTAGATGATGTTGCTGAATTGGGTTCTGTTGAGGAAGATAGGTGTTTGAGGAAGTTGAAGGATTTGAAGATTCGTGGGAGGGATGAGGAAAAAGGGTCTAGGAGTAAGCGCGACGAGGAAAAAGAGTCCAGAAGTAAGCGTGGGAGGGATGAGGTTGAAGAGAGGAGAGTGAATTCTAATGGCGGAGATAAGGAAGACAAGGGGAAGAAACAGGTTTCTTGGCTTACAAGTCATATTCGGGTTAGAGTGGTTAGTCGAAGTTTCAAAGGGGGGAGATATTATTTGAAGAAAGGAGAGGTTTTGGATGTTATTGGGCCTACTACTTGTGATATAACTATGGATGAGAGTAGGGAGATTATTCAAGGGGTGTCGCAAGATATGCTCGAGACGGCTATTCCACGACGAGGTGGACCTGTTCTTGTATTGTCTGGTAAACATAAGGGTGCCTTTGGGAGTCTTGTTGAGAGGGATTTGGATAGGGAGATTGGTATAGTTAGGGATGCTGATACTCATGAGATGCTCAGTGTCAAACTTGAGCATATGGCAGAGTATATTGGGGACCCAAGCTTATTGGGACATTGA 633 0.4408 DVLVLKVLGSGDKVEVKVDDVAELGSVEEDRCLRKLKDLKIRGRDEEKGSRSKRDEEKESRSKRGRDEVEERRVNSNGGDKEDKGKKQVSWLTSHIRVRVVSRSFKGGRYYLKKGEVLDVIGPTTCDITMDESREIIQGVSQDMLETAIPRRGGPVLVLSGKHKGAFGSLVERDLDREIGIVRDADTHEMLSVKLEHMAEYIGDPSLLGH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111628g00001 210 Gene3D - 95 149 - -
Trme111628g00001 210 PANTHER G PATCH AND KOW-CONTAINING 3 206 IPR045166 GO:0000398
Trme111628g00001 210 MobiDBLite consensus disorder prediction 44 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111628g00001 Trme-Chr111628 19 651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111628g00001 91 183 C2H2 Transcription Factor Family AT1G55460 32.258 1.25e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111628g00001 K13101 - gmx:100784983 267.7