Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme111572g00001 | ATGATATTTATTGATGAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGGGTTGAAGAGCTATCTAAAAGATTGGTTGGAACCTTATTGAAGCTGATGGATGGAATTAGTATAAATGGAGGATTAGTTGTAATTGCTGCTACTAATAGGCCTGACCATGTTGATCCAGCTCTCAGACGACGTGGAAAATTTGACCAGGATATTGAAATTG | 211 | 0.3839 | MIFIDEIDAIAPPRKDGVEELSKRLVGTLLKLMDGISINGGLVVIAATNRPDHVDPALRRRGKFDQDIEI | 70 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme111572g00001 | 70 | ProSitePatterns | AAA-protein family signature. | 42 | 61 | IPR003960 | GO:0005524|GO:0016887 | |
Trme111572g00001 | 70 | Gene3D | - | 1 | 70 | IPR027417 | - | |
Trme111572g00001 | 70 | PANTHER | AAA DOMAIN-CONTAINING | 2 | 65 | IPR045199 | - | |
Trme111572g00001 | 70 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 70 | IPR027417 | - | |
Trme111572g00001 | 70 | Pfam | ATPase family associated with various cellular activities (AAA) | 2 | 70 | IPR003959 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme111572g00001 | Trme-Chr111572 | 60 | 405 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme111572g00001 | 1 | 70 | Calmodulin-binding Proteins | AT3G56690 | 67.143 | 1.18e-27 | 101 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme111572g00001 | - | - | lja:Lj1g3v4093240.1 | 106.686 |