Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111562g00001 ATGGGAAGTTTTGGTGGACATGGAATGGGTGGAGGACCATCACTTGATCTTGATCTATTACCAGGAAGTTCGTCAACAATGCAAAATGTTCCTTACCAACCTGCTTGTCTTTCCGAAATGGAAAAGTCGGTAATGTCTGACATTGCGACAAATGCTATGGATGAATTGGTTAGGCTTTTGCAGACTGATGAGCCTTTGTGGATGAAATCAAATACTGATGGAAGAGATCTTCTTAATCTTGATACCTATGATAGAATGTTTCCTAAGGCTAATAATCGGTTGAAGAATCCGAATATTCGTACTGAAGCTTCTAGGGATTCTGGTGTTGTTATTATGAATGGCTTAACTTTGGTTGAAATGTTTATGGATCCTAACAAGTGGATGGAGCTATTTCCTACTATTGTGGCAATGGCAAAGAAAATTGAA 426 0.3873 MGSFGGHGMGGGPSLDLDLLPGSSSTMQNVPYQPACLSEMEKSVMSDIATNAMDELVRLLQTDEPLWMKSNTDGRDLLNLDTYDRMFPKANNRLKNPNIRTEASRDSGVVIMNGLTLVEMFMDPNKWMELFPTIVAMAKKIE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111562g00001 142 SUPERFAMILY Bet v1-like 39 137 - -
Trme111562g00001 142 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 28 142 IPR042160 -
Trme111562g00001 142 Pfam START domain 48 132 IPR002913 GO:0008289
Trme111562g00001 142 ProSiteProfiles START domain profile. 38 142 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111562g00001 Trme-Chr111562 8 546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111562g00001 1 141 Homeobox Transcription Factor Family AT1G73360 54.422 1.37e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111562g00001 K09338 - cit:102613958 202.216