Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111552g00001 ATGGCTGAGGAAAAAGAGAAAAAAGAAAAACTACCATCATCGCCGCCAACCTCATCATCACATGATTCGCAATCAGTTAAACTAGTTGCGAATCGTGATGAGTTTGAAGAAGCTGAGAAACCTCGTGGTGGACCCACGATTTCTTTTCTTATGGGGAATCAAGGATTGAAAGCTATTAATGGAAACAAGGGTAAGATTCATGAGTGTTCTATTTGTGGATCAGAATTCACATCTGGACAAGCATTGGGTGGACACATGAG 260 0.4115 MAEEKEKKEKLPSSPPTSSSHDSQSVKLVANRDEFEEAEKPRGGPTISFLMGNQGLKAINGNKGKIHECSICGSEFTSGQALGGHM 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111552g00001 86 PANTHER ZINC FINGER PROTEIN ZAT5 34 86 - -
Trme111552g00001 86 MobiDBLite consensus disorder prediction 27 41 - -
Trme111552g00001 86 MobiDBLite consensus disorder prediction 1 48 - -
Trme111552g00001 86 Pfam C2H2-type zinc finger 67 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111552g00001 Trme-Chr111552 1 260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111552g00001 51 86 C2H2 Transcription Factor Family AT2G28200 66.667 1.85e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111552g00001 - - cam:101512661 112.079