Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11151g00001 ATGGAGGAAATTTACAGTTACAATTTAGGACCAGGCCATGTTGTCACGTCCGGCCCAGCGTCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATACTTGGAGTCAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGACGGAAAGCGGCCTCTTCTGACTGGTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGCTGATCTTACATTTACAGACAACTCTAGCTGGATAAGAAGTCGGAAGTTCAGGCTGGGGTTAAAAGTTTCCTCAGGTTTTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGACTGATGAGGTCTGGAGATTGGAGAAGATTGGCAAGGATGGATCCTTTCACAAAAGGCTAACTAAAGCAGGCATATGTTCCGTTGAAGATGTCCTTCAACTTGTGGTTAGAGACCCACAAAGATTGCGGAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGAGGTTCTTGTTGAACATGCAAAGACATGTGTCCTCAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAATATCTACGAGTTGAGTGGCTTAATCACCAATGACCAATATTACTCTGCTGATTCTCTCTCTGATAGTCAAAAG 747 0.4284 MEEIYSYNLGPGHVVTSGPASCVKLDVIVLEGDFNNEDDDTWSQEEFESHVVKERDGKRPLLTGGDLQVTLKEGVGTLADLTFTDNSSWIRSRKFRLGLKVSSGFCEGMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLTKAGICSVEDVLQLVVRDPQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADSLSDSQK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11151g00001 249 Pfam Calmodulin binding protein-like N-terminal domain 13 124 IPR046831 -
Trme11151g00001 249 Pfam Calmodulin binding protein central domain 137 202 IPR046830 -
Trme11151g00001 249 Pfam Calmodulin binding protein C-terminal domain 207 249 IPR046829 -
Trme11151g00001 249 PANTHER OS02G0177800 PROTEIN 13 248 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11151g00001 Trme-Chr11151 23 1079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11151g00001 12 249 Calmodulin-binding Proteins AT4G25800 78.571 1.09e-135 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11151g00001 - - gmx:100802994 442.195