Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111489g00001 AATGAAGCCAAAGAAAAAGATCAATTGAAATTGGCTTGGTCAACAAGGAAGAAAATTTGCATCGGTATTGCTAGAGGTTTGGCGTACCTTCATGAAGAGTCGAGGCTAAAGATAGTTCACAGAGACATCAAGGCAACTAATGTGTTACTCGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAACTTAAAGATGACGAATACACCCACATAACCACTAGAATAGCCGGCACTTATGGATACATGGCTCCAGAATATGCAATGCATGGTTATTTGACGGANAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATAGTTAGTGGGAAGCACAACACCATGAACCAGCCAAAGGATGAATGCTTCTCTCTTGTTGATTGG 396 0.3965 NEAKEKDQLKLAWSTRKKICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKDDEYTHITTRIAGTYGYMAPEYAMHGYLTXKADVYSFGVVALEIVSGKHNTMNQPKDECFSLVDW 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111489g00001 132 Pfam Protein kinase domain 10 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme111489g00001 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme111489g00001 132 SUPERFAMILY Protein kinase-like (PK-like) 11 125 IPR011009 -
Trme111489g00001 132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 38 50 IPR008271 GO:0004672|GO:0006468
Trme111489g00001 132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 132 - -
Trme111489g00001 132 Gene3D Transferase(Phosphotransferase) domain 1 2 132 - -
Trme111489g00001 132 FunFam Lectin-domain containing receptor kinase A4.3 3 132 - -
Trme111489g00001 132 SMART serkin_6 2 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111489g00001 Trme-Chr111489 86 651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111489g00001 5 132 Receptor kinase-like Gene Family AT1G53430 80.469 3.60e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme111489g00001 Pkinase 7.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111489g00001 - - psat:127081874 248.054