Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111401g00001 ATGCTGCTCATCCTTGATATTCTAGTTCAATTTCCAAACATAAAGGTTGATGATTCAGTGGAGCCAGATGAGAATGAAACTCAAAAAGGGGCTGACTATGATGGACCAATTAAGATTTGGGGTAACTTAGTTGCCTTCTTAGAAAAAATAGATACTGAGTTTTTCAAGAGCTTGCAGTGCATAGATCCTCATACACGTGAGTACGTCCAGAGACTCAGAGATGAGCCCATGTTTTTGGTTCTTGCTCAAAATGTCCAGGAATATCTTGAAAGGAGTGGAGATTTCAAAKCATCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCATTTACTACAAACCACAAGAGGTTTATGATGCCATGAGAAAATTGGCTGAGCTGACAGAAGATGGAGATAATGAAGGCGAGGCTAGAGAGGAGGCCAAAGGGTTTGAGGATACAAGAATTCCTATTGCATTTGTTGTTACTCCAGAGCTTGTGTCTCGGAAACCCACCTTCCCGGAGAATAGCAGGGCCCTAATGGATGTATTAGTTTCACATATATACAAATATGGTGACGAGCACACTAAAGCACGGGCAATGCTTTGTGATATATATCACCATGCTCTCCTTGATGAGTTCTCAAT 623 0.4157 MLLILDILVQFPNIKVDDSVEPDENETQKGADYDGPIKIWGNLVAFLEKIDTEFFKSLQCIDPHTREYVQRLRDEPMFLVLAQNVQEYLERSGDFKXSSKVALRRVELIYYKPQEVYDAMRKLAELTEDGDNEGEAREEAKGFEDTRIPIAFVVTPELVSRKPTFPENSRALMDVLVSHIYKYGDEHTKARAMLCDIYHHALLDEFS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111401g00001 207 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 2 206 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Trme111401g00001 207 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 207 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111401g00001 1 206 Eukaryotic Initiation Factors Gene Family AT3G56150 72.330 1.02e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111401g00001 K03252 - gmx:100781967 354.755