Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11135g00001 ATGAAAGTTTTGCTTATGACTTTGCAGAATGCTCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTAGTTGCCACCTGCTTAGTCAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCTATTCTCGAAGGCCTTGCTCCATTAGGAGACCGTTTTAGAACGCTGAAGGCTAAAGAGGCAGATTTATTGATGCAGAACAAGGCTCTTTATGAGGATATGGAGCAATTATCTCAGATTCAAGATGCAGACATGTCAAATGCAGAAGAGCCAGATACAGATAAGAAGAAAAAAGACATATCAAATGACTTAAAGGTTCCAGCAGAGGAGCCATCTGCTTCTAATCATTCGGATGGTACATCCACACAGGACAAGGAGGATTTGGAAAGTTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTCAAGTATGCTCATCTCAGTACATTCCCACCCCCACCACCGCCCATTTCCTAG 555 0.3784 MKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLXXXXXXXXXXXXXXXXXXILEGLAPLGDRFRTLKAKEADLLMQNKALYEDMEQLSQIQDADMSNAEEPDTDKKKKDISNDLKVPAEEPSASNHSDGTSTQDKEDLESSLASFPIKPLQALKYAHLSTFPPPPPPIS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11135g00001 184 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 147 IPR047173 GO:0043539
Trme11135g00001 184 MobiDBLite consensus disorder prediction 105 158 - -
Trme11135g00001 184 Coils Coil 45 48 - -
Trme11135g00001 184 MobiDBLite consensus disorder prediction 113 130 - -
Trme11135g00001 184 Gene3D Transferase(Phosphotransferase) domain 1 1 56 - -
Trme11135g00001 184 SUPERFAMILY Protein kinase-like (PK-like) 7 50 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11135g00001 Trme-Chr11135 169 1573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11135g00001 1 169 MAP Kinase Kinase Kinase Kinase AT5G14720 52.604 4.15e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11135g00001 K08835 - gmx:100778837 215.698