Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme111326g00001 ATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGCCAGAGCTCGTCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTAATGGATCTTATAGATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGTTCGTTGAATGTGAAGATCCAGGCAGCAACTGTTTTGGGCTCACTTTGCAAAGAAAATGAACTGAGGGTAAAAGTTTTGCTTGGTGGATGTATTCCTCCATTGCTTGGTCTGCTAAAGTCAAGTTCTACTGAAGGTCAAATTGCTGCTGCAAAGACTATATATGCTGTCTCTCAAGGTGGGGTGAAAGATCA 389 0.4473 MEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLMDLIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKD 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme111326g00001 129 Gene3D - 4 126 IPR011989 -
Trme111326g00001 129 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 129 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Trme111326g00001 129 Pfam Armadillo/beta-catenin-like repeat 52 82 IPR000225 GO:0005515
Trme111326g00001 129 SUPERFAMILY ARM repeat 15 124 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme111326g00001 Trme-Chr111326 1 389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme111326g00001 22 120 U-box Gene Family AT2G28830 33.333 1.08e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme111326g00001 - - cam:101494820 242.276