Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1112842g00001 ATGTTATCGTGTGCTGGGGAAGATAGGTTGCAGACGGGGATGAGAGGTGCGTTTGGGAAACCATTAGGAACGTGTGCTAGGGTTAATATTGGTCAG 96 0.4896 MLSCAGEDRLQTGMRGAFGKPLGTCARVNIGQ 32
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1112842g00001 32 SUPERFAMILY Ribosomal protein L16p/L10e 1 32 IPR036920 GO:0003735|GO:0005840|GO:0006412
Trme1112842g00001 32 Gene3D Ribosomal protein L10e/L16 1 32 IPR036920 GO:0003735|GO:0005840|GO:0006412
Trme1112842g00001 32 PANTHER 60S RIBOSOMAL PROTEIN L10 1 32 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1112842g00001 Trme-Chr1112842 37 132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1112842g00001 1 32 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 90.625 7.89e-15 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1112842g00001 K02866 - jre:109020863 65.855