Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110792g00001 ATGCAAACACTCACACTCCTGCTCTTGTTTATTTCACCATTGTTTCTTCGGTTCTCAACCGCGGCAAAAACACCGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATACCCAACTCTTTGCGTCCAAACACTGACCAACCAAGTAACTCCCACCACAAAGCCATTAGACCTAGCTCAAGCCGCCGTAAAAGCGAGTCTCACTCGCACTCTCACTCTTTCCGTTTACCTCAAAAACACCCTAAAATCACAGGCGAAACCGGCAGTGGAGTCCACCACCAGCAACAGAAAACGAGTTGCCCTAAATGACTGTGTTGCTCAGATTACTGACTCGGTTTCTGAGTTAAACCAGACGTTAAACGAGTTAAAACATCTTCATATGGGAACTTTTGAGTGGCAAATAAGTAACGCTCAAACATGGGCTAGTACTGCTATAACAAACGGTAATTTATGTGTTAATGGTTTGAATAGGAAAGGTGCTGAAGAGAAGGTGAAGATGGAAGTGAAACGTAGGGTTAAGGATGTTTCTATGTTTACTAGTAATGCTCTTTACTTTATCAGT 564 0.4326 MQTLTLLLLFISPLFLRFSTAAKTPQDLLRSSCAQARYPTLCVQTLTNQVTPTTKPLDLAQAAVKASLTRTLTLSVYLKNTLKSQAKPAVESTTSNRKRVALNDCVAQITDSVSELNQTLNELKHLHMGTFEWQISNAQTWASTAITNGNLCVNGLNRKGAEEKVKMEVKRRVKDVSMFTSNALYFIS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110792g00001 188 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 184 - -
Trme110792g00001 188 CDD PMEI-like_3 31 188 - -
Trme110792g00001 188 Pfam Plant invertase/pectin methylesterase inhibitor 28 184 IPR006501 GO:0004857
Trme110792g00001 188 Coils Coil 106 126 - -
Trme110792g00001 188 SMART PMEI_2 24 186 IPR006501 GO:0004857
Trme110792g00001 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 188 IPR035513 -
Trme110792g00001 188 NCBIfam pectinesterase inhibitor domain 4 187 IPR006501 GO:0004857
Trme110792g00001 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 187 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110792g00001 28 187 Carbohydrate Esterase AT3G14310 30.247 9.26e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110792g00001 - - mtr:25494163 261.151