Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1106477g00001 ATGACAGGCTGCTCAATTTTTTTTGTTGGATCTCATGTTTGGGTTGAGGACCCTGATGTAGCTTGGATAGAAGGAGAAATCCTTGAATCTAATGATCAAGAGATCACCATTAGTAATGAATCAGGAACAAAG 132 0.3864 MTGCSIFFVGSHVWVEDPDVAWIEGEILESNDQEITISNESGTK 44
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme1106477g00001 44 SUPERFAMILY Myosin S1 fragment, N-terminal domain 6 32 - -
Trme1106477g00001 44 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 44 IPR004009 GO:0003774|GO:0005524|GO:0016459
Trme1106477g00001 44 Pfam Myosin N-terminal SH3-like domain 10 43 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme1106477g00001 Trme-Chr1106477 47 178 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1106477g00001 9 44 Myosins gene family AT1G08730 58.333 4.72e-11 53.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1106477g00001 K10357 - mnt:21394610 60.4622