Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110482g00001 ATGGAGAACAAAGATGAAGATGTAACAATAGGAGCAAACAAGTATAAAGAAAACCAACCAATAGGAACTGCTGCACAAGCACAAGACAATGAAGCTAAAGACTACAAAGAAGCACCTTCAGCACCTTTATTTGAACATGGAGAGTTGTCATCATGGTCATTTTACAGGGCAGGGATAGCTGAATTTGTAGCTACATTTTTATTTCTTTATATAACCGTTTTAACCGTTATAGGTGTTAATAAATCTAATAATAAGTGCTCCTCAGTTGGTGTTCAAGGGATTGCTTGGTCTTTTGGTGGAATGATTTTTGCTCTTGTTTATTGTACCGCTGGTATATCAGGTGGTCACATTAACCCGGCAGTGACATTTGGACTTTTCTTGGCACGCAAGCTATCCCTATCAAGGGCAGTGTTCTACATAATTATGCAATGTTTGGGAGCTATTTGTGGTGCTGCTGTTGTTAAGGGTTTCCAA 474 0.3882 MENKDEDVTIGANKYKENQPIGTAAQAQDNEAKDYKEAPSAPLFEHGELSSWSFYRAGIAEFVATFLFLYITVLTVIGVNKSNNKCSSVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLSRAVFYIIMQCLGAICGAAVVKGFQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110482g00001 158 SUPERFAMILY Aquaporin-like 48 156 IPR023271 -
Trme110482g00001 158 Pfam Major intrinsic protein 48 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme110482g00001 158 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme110482g00001 158 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme110482g00001 158 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme110482g00001 158 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Trme110482g00001 158 Gene3D Glycerol uptake facilitator protein. 41 158 IPR023271 -
Trme110482g00001 158 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 158 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110482g00001 Trme-Chr110482 39 655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110482g00001 1 158 Major Intrinsic Protein MIP AT4G00430 81.646 2.46e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110482g00001 K09872 - qsu:112000363 274.633