Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11047g00001 ATGCCAACTTTATGGGTGCTTTCTTCTCTTTTACCTATTGTTGGGGGAGTGGCACTAGCATCATTGACTGAAGTATCTTTCAATTGGATTGGATTCAGCACTGCAATGGCATCTAACCTTACGAATCAATCGCGGAATGTTTTGAGCAAAAAACTAATGGCTAATGAAGCGGATGCTTTGGACAATATCAATCTCTATTCGGTTATAACCATCATTTCCTTTTTCCTGTTGTTACCGTGTGCTATATTTTTGGAGGGTGTCAAGTTTACTCCTTCATACCTGCAATCTGCGGCCAGTCAAGGATTGAATGTTAGAGAGCTATGCGTAAGATCAGTTTTGGCTGCATTCTGCTTCCATGCATACCAGCAGGTGAAACTTTTTGAATATTGTTTTGCTTTGATTTTGTGA 408 0.3995 MPTLWVLSSLLPIVGGVALASLTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMANEADALDNINLYSVITIISFFLLLPCAIFLEGVKFTPSYLQSAASQGLNVRELCVRSVLAAFCFHAYQQVKLFEYCFALIL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11047g00001 135 PANTHER SOLUTE CARRIER FAMILY 35 2 125 - -
Trme11047g00001 135 Pfam Triose-phosphate Transporter family 2 124 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11047g00001 Trme-Chr11047 279 1363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11047g00001 2 124 Antiporters AT5G33320 65.041 4.99e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11047g00001 K15283 - gmx:100819280 221.09