Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110426g00001 ATGGCTGCGGATTGTATGAGGGGTAGTCACCTAGATGAGGTGAAACAAATGGTTGAGGAATACCGGAAACCGGTTGTGCCGTTAGGTGGAAAAGGTTTAACAATATCACAAGTGGCTGCAATTGCAACCCATAATACCGGTGTGACGGTTAAACTTGATGAAGAGACACGCGCCGCTGTTAAAGCTAGTAGTGATTGGGTTGTTGAAAGTTTGAATAATGGGACTGATAGCTATGGAGTTACCACTGGATTTGGTGCAACCTCACATAGGAGAACAAAACAAGGTGGTGCTCTCCAAAATGAACTCATAAG 311 0.4437 MAADCMRGSHLDEVKQMVEEYRKPVVPLGGKGLTISQVAAIATHNTGVTVKLDEETRAAVKASSDWVVESLNNGTDSYGVTTGFGATSHRRTKQGGALQNELI 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110426g00001 103 PANTHER HISTIDINE AMMONIA-LYASE 1 103 IPR001106 -
Trme110426g00001 103 MobiDBLite consensus disorder prediction 79 103 - -
Trme110426g00001 103 Pfam Aromatic amino acid lyase 33 103 IPR001106 -
Trme110426g00001 103 SUPERFAMILY L-aspartase-like 2 103 IPR008948 GO:0003824
Trme110426g00001 103 Gene3D - 1 103 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110426g00001 Trme-Chr110426 323 633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110426g00001 1 103 Monolignol Biosynthesis Gene Families AT3G53260 74.757 6.95e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110426g00001 K10775 - jre:108997102 167.933