Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110417g00001 ATGAGACTCTACCCAGCAGCACCAGGAGCATTCAGAGAGGCTAAAACAGATATCACCTATGAAGGTTTTACTATTCCAAAGGGATGGAAGATATTTTGGGCATTTATTGGAACAAATAAGAATCCCAAGTACTTTGATGAACCTGAAAGTTTTGATCCATCAAGGTTTGAAGGGAATGTTCCAGCACCATACACTTATATACCCTTTGGAGCAGGACCAAGATGTTGTCCTGGAAAGGACTACACCAGATTTGTGATTCTCACTTTCATTCACAATCTTATAACAAAGTTCAAATGGGAAGTTATATTTCCAGATGAGAAAGTATCTGGTGCTTTGGTGCCTATCCCAGCTGAGGGAATTCCTATTCGTCTTCATCACTTGTAA 384 0.3984 MRLYPAAPGAFREAKTDITYEGFTIPKGWKIFWAFIGTNKNPKYFDEPESFDPSRFEGNVPAPYTYIPFGAGPRCCPGKDYTRFVILTFIHNLITKFKWEVIFPDEKVSGALVPIPAEGIPIRLHHL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110417g00001 127 PRINTS E-class P450 group I signature 76 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme110417g00001 127 PRINTS E-class P450 group I signature 34 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme110417g00001 127 PRINTS E-class P450 group I signature 66 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme110417g00001 127 SUPERFAMILY Cytochrome P450 1 125 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme110417g00001 127 PANTHER CYTOCHROME P450 26 1 114 - -
Trme110417g00001 127 Gene3D Cytochrome P450 1 125 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme110417g00001 127 Pfam Cytochrome P450 1 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme110417g00001 127 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 69 78 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110417g00001 Trme-Chr110417 2 558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110417g00001 1 127 Cytochrome P450 AT3G19270 44.186 1.68e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110417g00001 K20667 - tpra:123917065 261.922