Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11040g00001 ATGGGATTTAAAATTAACATCAAAGAATTGGTTTTGTCTATTTTGATCTTCCTCATAATCCCAACTCTAATAGCCGCAGAATGTACATGCGATGAAGAAGATGAAGATAGAGACAAAAGCAAAGCCCTACGTTACAAAATAGCGGCTTTAGTATCGATACTAGTTGCAAGTGCAATTGGTGTTTGCATTCCACTTCTTGGAAAAGTGATACCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANATCAAAGCCTTTGCTGCCGGTGTGATATTGTCCACCGGTTTCATTCATGTCCTTCCCGATGCTTTTGAGAATCTCACTTCACCTTGTTTAAATGAACATCCTTGGGGTGATTTTCCGTTCACCGGTTTTGTGGCTATGTGCACCGCTATGGGGACTCTTATGGTTGATACTTATGCCACTGCTTATTTTCAGAACCATTATACTAAAAATGCACCGACACAAGTTGAGAGTCATGATCATGAGGCAACCTCAGATGTGGAGAAGGATGCGGAGCATGAAGGACATGTGCATGTTCATACTCATGCATCACATGGTCATGCACATGGCCCT 576 0.3941 MGFKINIKELVLSILIFLIIPTLIAAECTCDEEDEDRDKSKALRYKIAALVSILVASAIGVCIPLLGKVIPXXXXXXXXXXXIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYTKNAPTQVESHDHEATSDVEKDAEHEGHVHVHTHASHGHAHGP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11040g00001 192 MobiDBLite consensus disorder prediction 155 182 - -
Trme11040g00001 192 PANTHER ZINC/IRON TRANSPORTER 42 177 - -
Trme11040g00001 192 MobiDBLite consensus disorder prediction 155 192 - -
Trme11040g00001 192 Pfam ZIP Zinc transporter 44 183 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11040g00001 Trme-Chr11040 1096 1671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11040g00001 11 191 Inorganic Solute Cotransporters AT3G12750 45.946 2.52e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11040g00001 K14709 - gmx:547695 226.868