Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110225g00001 CTTGATGATCTACCTTCAGGAATTGAACATGGTATCTTTGAAGCCTCATTAGATGAACTTGACTCAAGGGTTTTTCAATTGACCTCTAAAAATATCAACAACCTTAAGGAAAAGGCAAAGGCAATTAATAACATTGCACATGTCACCGGTTTTAATGTCATCACCGCACATCTATGGAGATGTAAGGCGTTATCTGGACCGTACGATCCTAATAGATCATCAACTATATTATATGCTGTTGATATACGTTCAAAGTTAAATCCTCCACTGTTAAAAGCGTACACCGGAAACGCGGTTTTAACAGCGTACGCTTCAACGAAGTGTGAGGAATTGAAGGAAGGAGAATTCTCGAGGTTGNNNNNNNNNNANNNNNNNNGATCAAGAAGAATGAGTGATGAGTATGCAAAGTCTATTATTGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGGGAGGTTTTGGTGTCTTCATGGTGGAGGTTAGGGTTTGAAGATGTGGTGAAGGTGGTGATGCTGAGGTAA 522 0.3851 LDDLPSGIEHGIFEASLDELDSRVFQLTSKNINNLKEKAKAINNIAHVTGFNVITAHLWRCKALSGPYDPNRSSTILYAVDIRSKLNPPLLKAYTGNAVLTAYASTKCEELKEGEFSRLXXXXXXXSRRMSDEYAKSIIDWGELYNGFPNGEVLVSSWWRLGFEDVVKVVMLR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110225g00001 173 Gene3D - 16 168 IPR023213 -
Trme110225g00001 173 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 166 - -
Trme110225g00001 173 Pfam Transferase family 22 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110225g00001 24 144 Monolignol Biosynthesis Gene Families AT5G48930 29.508 5.49e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110225g00001 K13065 K15400 gmx:100780971 228.794