Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110216g00001 ATGCCGCCGTTGAGTAAACCTCCAGACGGAAACATCCCGCCGGCGATGTCGCCGGAGTCTTCTTCCGATGAAGAGAGTAACGAAACGGCGTTTCATTCGCCGCAGAATTCGTCGTTAAGTCAGGAAGATGGATTTTACACACCGTTTTCAGTTTCACGACAGAATTCTCTTGTTAACGGTAGTCCGGCGAAGAGAGAGAATCATTCGACGGTGACGCCTCTTCCGTTATCGAAAAGAACTTCGCCGAAATCTCGTCTTTCTAATAATTCGCCGGATATTCGACACGTCATCATTCCGTCTATTAAACAAACTCCGCCGGAAAAACAGTTAACCACCTCCGGAGGCGGTGGACATTCAAGAAAGCCAAAATTCTCAGCGCCTCCGCCACCTCCGAATTTGACGCATCTTCAATCAACAACTAATACATTCTCAAACATCTCTAAAACTTCACATAATCCTCCTCCTCCTGCTCCTCCTCCGCCACCACCACCTCCTCCTCCTCCGCCAATGATTCGAAAATCAGTGTCTCCAACGCCAGCGGTTTCAGGTGGTGTTGATTCTGCTG 565 0.4903 MPPLSKPPDGNIPPAMSPESSSDEESNETAFHSPQNSSLSQEDGFYTPFSVSRQNSLVNGSPAKRENHSTVTPLPLSKRTSPKSRLSNNSPDIRHVIIPSIKQTPPEKQLTTSGGGGHSRKPKFSAPPPPPNLTHLQSTTNTFSNISKTSHNPPPPAPPPPPPPPPPPPMIRKSVSPTPAVSGGVDSA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110216g00001 188 MobiDBLite consensus disorder prediction 1 188 - -
Trme110216g00001 188 MobiDBLite consensus disorder prediction 135 150 - -
Trme110216g00001 188 MobiDBLite consensus disorder prediction 151 174 - -
Trme110216g00001 188 MobiDBLite consensus disorder prediction 104 118 - -
Trme110216g00001 188 MobiDBLite consensus disorder prediction 15 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110216g00001 Trme-Chr110216 11 575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110216g00001 1 141 FH2 protein (formin) Gene Family AT5G67470 39.375 1.16e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110216g00001 - - gmx:100798670 176.022