Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110185g00001 ATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTACGAGACGATGGTCACATAATGCTCTCAGATTTTGATCTTTCMCTCAGATGTACCGTTTTGCCTACTCTTGTTAGAGGTTATGACRGCGAYCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCAACATCAGYATGCATACAACCTGCATGTTTTATTCCTCGGCTCTTTCCTCAGAAAAACAAGAAATCGAGGAAACCAAGAGCTGAACCTGGTTTTCCTTCCAGCAGACTTCCAGAGCTTGTTGCCGAGCCTACTGCTGCTCGATCTATGTCCTTTGTCGGCACCCATGAATACCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCGGTTGATTGGTGGACATT 422 0.455 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLVRGYDXDPSKRAGGAFCVQPACIEPTSXCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110185g00001 140 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Trme110185g00001 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme110185g00001 140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Trme110185g00001 140 Gene3D Transferase(Phosphotransferase) domain 1 110 140 - -
Trme110185g00001 140 SUPERFAMILY Protein kinase-like (PK-like) 3 139 IPR011009 -
Trme110185g00001 140 PANTHER FLIPPASE KINASE 1-RELATED 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110185g00001 Trme-Chr110185 1 422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110185g00001 1 140 AGC Kinase Gene Family AT2G44830 75.172 2.86e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme110185g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110185g00001 - - mtr:25500048 289.271