Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110153g00001 GTTCAAGTTTGTGGGACTGTTGCTTATGTTGCACAAACGTCTTGGATTCAAAACGGGACAATTGAAGAAAACATTCTGTTTGGTTTACCAATGAACAGACAAAAGTACAATGAAGTTATCAGGGTTTGTTGCTTGGAGAAAGACTTAGAGATGATGGAATTTGGGGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTCAGTGGAGGTCAGAAGCAGCGTATACAACTTGCTAGGGCTGTATACCAAGACTGTGATATATATCTTCTTGATGATGTCTTCAGTGCAGTCGATGCACATACCGGCACTGAAATATTTAAGGTGCTTATCCTCTCATTCTCTGTGCTAATGTTTCCTCCTTTTGGCATTAATTTTACTGTTAATCAATCATAA 393 0.3995 VQVCGTVAYVAQTSWIQNGTIEENILFGLPMNRQKYNEVIRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGTEIFKVLILSFSVLMFPPFGINFTVNQS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110153g00001 130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 110 IPR027417 -
Trme110153g00001 130 Gene3D - 1 116 IPR027417 -
Trme110153g00001 130 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 110 - -
Trme110153g00001 130 Pfam ABC transporter 6 93 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110153g00001 Trme-Chr110153 152 544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110153g00001 7 109 Calmodulin-binding Proteins AT2G36910 37.736 9.26e-14 65.1