Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme110003g00001 ATGAGAAATGAAGAAAGTTTGGGACAAATTTATGGAAGTATGCAAGATGCTTACTGGCAAATGCAAACCCCTCTAACTCACCAGGAACTGCCCGCTCCGGGATTAAAAGATTTGAAAGAATCAACTATTCAATTGGCATTAAGTATGGGAAACATAAATAGTGCAGTTGATGAATCGATATTTGATGTTGAGAAAGAAATTGATGACTTATTGCCTGTTGAGGTTAAAGAACAGCGAGTAAGCAACTTGCTCCAATCGTTGATGGTAGGAGGATGTGTAGCAGCTATGCCTTTCCTGAAAATGATTCCAACTTCTCTACTGTGGGGATATTTTGCTTTCATGGCTATTGAAAACTTACCTGGCAACCAGTTCTGGGAACGAATTTTATTTATTTTCACTGCATCGAGCAGAAGATACAAGTATTGTCTTTAA 432 0.3819 MRNEESLGQIYGSMQDAYWQMQTPLTHQELPAPGLKDLKESTIQLALSMGNINSAVDESIFDVEKEIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPFLKMIPTSLLWGYFAFMAIENLPGNQFWERILFIFTASSRRYKYCL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme110003g00001 143 PANTHER ANION EXCHANGE PROTEIN 56 140 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme110003g00001 143 Pfam HCO3- transporter family 73 135 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme110003g00001 Trme-Chr110003 36 629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme110003g00001 1 140 Antiporters AT3G62270 71.429 2.94e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme110003g00001 K24194 - gmx:100795777 243.047